

@968

14 years 
Peter 
adding mssing files



@966

14 years 
Peter 
fixing some doxygen warnings



@965

14 years 
Peter 
Adding CommandLine? class. finishes #240



@964

14 years 
Peter 
adding function to set maximal training epochs in SVM, and fixed so C …



@963

14 years 
Peter 
fixes #268. SVM throws if when train() fails



@961

14 years 
Peter 
correcting NBC train. refs ticket:271



@960

14 years 
Peter 
fixed ticket:271



@959

14 years 
Peter 
Fixed so NBC and SVM are throwing when unexpected DataLookup2D is …



@958

14 years 
Peter 
allowing mixture of weighted and unweighted iterators in vector_distance



@956

14 years 
Markus Ringnér 
Bug fixing



@950

14 years 
Peter 
SVM::make_classifier is now throwing if KernelLookup? is not passed.



@949

14 years 
Peter 
fixing bug in AveragerWeighted? so actually weights are used when …



@948

14 years 
Markus Ringnér 
Adding support and checks for intended lookups in classifiers



@938

14 years 
Peter 
improving constness correctness



@937

14 years 
Peter 
changing name of IteratorTraits? to iterator_traits



@936

14 years 
Peter 
reimplementing yat_assert as a throwing function



@935

14 years 
Peter 
fixing doxygen problem



@934

14 years 
Peter 
fixing bug when range is one value only



@933

14 years 
Peter 
mad function now takes iterators



@932

14 years 
Peter 
median and percentile functions now take iterators rather than vectors



@931

14 years 
Markus Ringnér 
Working on ticket:259. Removed old Distance see ticket:250



@930

14 years 
Markus Ringnér 
Fixed support for MatrixLookup? in NCC. See ticket:259



@929

14 years 
Peter 
grammar



@928

14 years 
Peter 
removing some includes not needed



@927

14 years 
Peter 
modifying weighted euclidean



@926

14 years 
Markus Ringnér 
Fixing minor mistakes so things gets installed with make install



@925

14 years 
Markus Ringnér 
NCC and IGP have been changed to templates on Distance



@921

14 years 
Jari Häkkinen 
Removed undefined macro on MacOSX. Now the yat_assert compiles.



@919

14 years 
Peter 
fixes #239



@917

14 years 
Peter 
fixes #257



@916

14 years 
Peter 
Sorry this commit is a bit to big.
Adding a yat_assert. The yat …



@915

14 years 
Peter 
fixing dox



@914

14 years 
Peter 
refactoring add function in Averagers, refs #246



@913

14 years 
Peter 
remove stupid extra include that was added in last ci



@912

14 years 
Peter 
Made add function for AveragerPair? no longer accept weighted …



@911

14 years 
Peter 
Made add function for Averager no longer accept weighted iterators. …



@910

14 years 
Peter 
impl add function for AveragerWeighted?. The function distinguishes …



@909

14 years 
Peter 
using weighted_iterator_traits, closes #151



@908

14 years 
Peter 
adding IteratorWeighted?.h in Makefile.am (so file is included in …



@904

14 years 
Peter 
removing assert from header file



@902

14 years 
Markus Ringnér 
Fixing mistake in last revision (forgot to add KNN.h)



@901

14 years 
Markus Ringnér 
Added a template KNN classifier where the distance measure is the …



@900

14 years 
Markus Ringnér 
Refs #251. Fixed so the unweighted distances are at the …



@899

14 years 
Peter 
changed euclidean to fulfill design criteria, removes …



@898

14 years 
Markus Ringnér 
A first suggestion for how to adress #250. Also removed contamination …



@897

14 years 
Peter 
removing keyword that was mistakingly added before



@896

14 years 
Peter 
…



@895

14 years 
Peter 
Another try, hm…



@894

14 years 
Peter 
setting missing property Id on files



@893

14 years 
Peter 
Removing make check' output. Please obey the rule that tests are mute …



@892

14 years 
Peter 
Fixed documentation of sum_squared_deviation



@891

14 years 
Markus Ringnér 
Minor modifications



@890

14 years 
Markus Ringnér 
Refs #245 #246 #247



@889

14 years 
Markus Ringnér 
Refs #245. A new structure to calculate distances between vectors that …



@888

14 years 
Peter 
fixing doxygen parsing



@887

14 years 
Peter 
made add function template so it accepts AveragerWeighted? too. Also …



@886

14 years 
Peter 
add function for Averager and AveragerPair? taking iterators refs #246



@884

14 years 
Peter 
some documentation



@883

14 years 
Peter 
fixing problems with iterator > const_iterator conversion



@882

14 years 
Peter 
fixing includes  sorry about that



@881

14 years 
Peter 
merged constIterator into Iterator and added an extra template …



@880

14 years 
Peter 
refs #244



@879

14 years 
Markus Ringnér 
Added support to utility::vector for gslfunctions that finds indices …



@878

14 years 
Markus Ringnér 
Problem with previous checkin fixed



@877

14 years 
Markus Ringnér 
This revision breaks the vector_test. I know this is against the rules …



@876

14 years 
Jari Häkkinen 
Added missing #include <cassert>



@875

14 years 
Peter 
rewriting SW algo, making code clearer, and perhaps removing a few bugs...?



@874

14 years 
Markus Ringnér 
Fixes ticket:237



@873

14 years 
Peter 
fixing some docs



@872

14 years 
Peter 
Some docs for TypeInfo?



@871

14 years 
Peter 
minor docs fix



@869

14 years 
Peter 
Adding SmithWaterman local alignment and modified ssearch to use this …



@868

14 years 
Peter 
fixes ticket:236



@867

14 years 
Peter 
adding function doing a SSEARCH between two strings



@866

14 years 
Markus Ringnér 
refs #236. EnsembleBuilder::predict bug fixed for matrixbased …



@865

14 years 
Peter 
changing URL to http://trac.thep.lu.se/trac/yat



@863

14 years 
Markus Ringnér 
Fixed bug in FeatureSelectorIR that resulted in incorrect results!.



@862

14 years 
Markus Ringnér 
Fixed bug in InputRanker? that sometimes gave rise to a bus error …



@861

14 years 
Peter 
adding class to store and compare std::type_info



@860

14 years 
Peter 
fixes #149  Target constructor from Target and vector<string>



@859

14 years 
Peter 
updated copyright



@858

14 years 
Peter 
refs #148 in EnsembleBuilder?



@857

14 years 
Peter 
refs #148 in NCC



@856

14 years 
Markus Ringnér 
The SNR score is now ok again and renamed SNRScore. Fixes #235"



@852

14 years 
Jari Häkkinen 
Fixes #228.



@851

14 years 
Jari Häkkinen 
Fixes #229.



@848

15 years 
Jari Häkkinen 
Merged log:/branches/0.3.1#838:846 to trunk.



@842

15 years 
Peter 
fixed typo in error msg



@837

15 years 
Peter 
Fixed include to be correct also when being casesensitive. refs #220 …



@833

15 years 
Jari Häkkinen 
Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …



@832

15 years 
Peter 
Refs #217 cleaning up makefile.am



@831

15 years 
Peter 
Refs #185.



@830

15 years 
Jari Häkkinen 
Fixes #206.



@829

15 years 
Jari Häkkinen 
Fixes #173.



@828

15 years 
Peter 
Generalized ConsenusInputRanker?, Fixes #151



@827

15 years 
Peter 
added Functors to be used in CIR. Refs #151



@826

15 years 
Peter 
documentation and some minor fixes Fixes #135



@825

15 years 
Peter 
removed minmax functions and moved shuffle into vector.*



@823

15 years 
Peter 
BootstrapSampler?. Fixes #134



@822

15 years 
Peter 
redesigned tTest fixes #212 and #156


